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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800253.1_cds_XP_016468954.1_6117
CDS Infomation

[gene=LOC107791402] [db_xref=GeneID:107791402] [protein=abscisic acid 8'-hydroxylase 1-like] [protein_id=XP_016468954.1] [location=complement(join(34009..34117,34241..34359,34461..34567,34688..34862,34974..35357,35513..35831,35944..36143))] [gbkey=CDS]
Sequence

ATGGAGTTTGTTTCTATGTTTTGCTTATCTGCTATTGTTTCTTTCTCTCTTCTTCTTATC
CATTCAATCTTCAAGTTCTTGGCTTTTGCTGCCAAGAAATTGCCTCTTCCTCCTGGCACT
TTGGGTTGGCCTTATATTGGAGAAACTTTTCAACTTTACTCTCAAAATCCCAATGTTTTC
TTTGCCTCAAAAGTCAAAAAGTATGGTTCAATATTCAAGACTCACATATTGGGTTGTAAT
TGTGTGATGATATCAAGTCCTGAAGCAGCTAAACAAGTTTTAGTCACAAGAGCTAACTTA
TTTAAGCCTACATTTCCAGCTAGTAAAGAAAGAATGTTGGGAAAACAAGCAATTTTCTTT
CATCAAGGTGATTACCATGCTAAGTTGAGGAAATTAGTCCTTCGTGCTTTCACGCCCGAA
TCGATCAGAAACATTGTCCCAGATATCGAATCCATCGTCGAAAGTACGCTCGAATCGTTC
GAAGGAAGATTGATTAACACTTATCAAGAAATGAAGACATATACATTCAATGTTGCATTG
ATTTCAATATTTGGAAAAGATGAAATCCTATACAGAGAAGATCTAAAGAGGTGTTATTAC
ATTCTAGAAAAAGGGTATAATTCAATGCCAATCAATCTTCCTGGTACATTATTCAATAAA
GCAATGAAAGCAAGGAAAGAATTAGCAAAAATTGTGGCAAAAATCATCTCAACTAGAAGG
GAAATGAAGATCAATCATACCGATTTACTTGGTTCTTTTATGGGAGATAAAGGACTCACT
GACGAACAAATTGCAGATAATATCATTGGTGTGATTTTCGCAGCTAGAGACACTACTGCT
AGTGTTCTTACATGGATCCTTAAATATCTTGGAGAAAACCCTAGTGTCCTACATGCTGTC
ACAGAAGAACAAGAGACTATAATGAGAAATAAAGAAGAGAATGGTGAAGAAAAAGTTCTA
AATTGGGCAGATACTAAAAATATGCCTTTAACTACAAGAGTAATTCAAGAAACACTCAGA
GTTGCTTCTATCTTATCTTTTACTTTTAGAGAAGCTGTTGAAGATGTTGAATTTGAAGGA
TATTTAATACCTAAAGGATGGAAAGTACTACCACTCTTTAGAAACATTCACCACAGCCCA
GACAATTTTCCTGAGCCAGAGAAATTTGATCCTTCAAGATTTGAGGTGTCACCAAAGCCC
AATACTTTCATGCCATTTGGCAATGGGGTCCACTCATGTCCAGGGAATGAATTAGCCAAG
ATGGAGATTTTGGTTCTTGTACATCATCTGACCACAAAGTACAGGTGGTCTATGATGGGC
CCACAAAATGGAATTCAGTATGGGCCATTTGCTCTTCCCCAAAATGGTCTGCCCATTAAG
CTATATCCCAAGAATTCATCACCATACGTCTAA

Peptide Sequence

PEP ID

XP_016468954.1
PEP Infomation

PREDICTED: abscisic acid 8'-hydroxylase 1-like [Nicotiana tabacum]
Sequence

MEFVSMFCLSAIVSFSLLLIHSIFKFLAFAAKKLPLPPGTLGWPYIGETFQLYSQNPNVF
FASKVKKYGSIFKTHILGCNCVMISSPEAAKQVLVTRANLFKPTFPASKERMLGKQAIFF
HQGDYHAKLRKLVLRAFTPESIRNIVPDIESIVESTLESFEGRLINTYQEMKTYTFNVAL
ISIFGKDEILYREDLKRCYYILEKGYNSMPINLPGTLFNKAMKARKELAKIVAKIISTRR
EMKINHTDLLGSFMGDKGLTDEQIADNIIGVIFAARDTTASVLTWILKYLGENPSVLHAV
TEEQETIMRNKEENGEEKVLNWADTKNMPLTTRVIQETLRVASILSFTFREAVEDVEFEG
YLIPKGWKVLPLFRNIHHSPDNFPEPEKFDPSRFEVSPKPNTFMPFGNGVHSCPGNELAK
MEILVLVHHLTTKYRWSMMGPQNGIQYGPFALPQNGLPIKLYPKNSSPYV

Transcript Sequence

Gene sequence data has not been registered.